MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,289
rRNA: 17
tRNA: 64
tmRNA: 1
Total number of protein coding genes annotated/found:
2,252
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000034.1
MBF0713046.1
Genome Viewer
NA
AA
1059/353
2902-3960
PTS transporter subunit IIC
SEQF5007|JADGMA010000034.1
MBF0713047.1
Genome Viewer
NA
AA
1458/486
4104-5561
ABC transporter substrate-binding protein/permease
SEQF5007|JADGMA010000034.1
MBF0713048.1
Genome Viewer
NA
AA
723/241
5554-6276
amino acid ABC transporter ATP-binding protein
SEQF5007|JADGMA010000034.1
MBF0713049.1
Genome Viewer
NA
AA
1164/388
6400-7563
tRNA epoxyqueuosine(34) reductase QueG
SEQF5007|JADGMA010000034.1
MBF0713050.1
Genome Viewer
NA
AA
471/157
7566-8036
tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL
SEQF5007|JADGMA010000034.1
MBF0713051.1
Genome Viewer
NA
AA
600/200
8216-8815
glucosamine-6-phosphate isomerase
SEQF5007|JADGMA010000034.1
MBF0713052.1
Genome Viewer
NA
AA
180/60
8843-9022
hypothetical protein
SEQF5007|JADGMA010000034.1
MBF0713053.1
Genome Viewer
NA
AA
399/133
9209-9607
hypothetical protein
SEQF5007|JADGMA010000034.1
MBF0713054.1
Genome Viewer
NA
AA
1386/462
9761-11146
class II fumarate hydratase
SEQF5007|JADGMA010000034.1
MBF0713055.1
Genome Viewer
NA
AA
831/277
12074-11244
RluA family pseudouridine synthase
SEQF5007|JADGMA010000034.1
MBF0713056.1
Genome Viewer
NA
AA
1113/371
12250-13362
GAF domain-containing sensor histidine kinase
SEQF5007|JADGMA010000034.1
MBF0713057.1
Genome Viewer
NA
AA
624/208
13382-14005
response regulator transcription factor
SEQF5007|JADGMA010000034.1
MBF0713058.1
Genome Viewer
NA
AA
465/155
14254-14718
helix-turn-helix transcriptional regulator
SEQF5007|JADGMA010000034.1
MBF0713059.1
Genome Viewer
NA
AA
1131/377
14939-16069
DUF445 domain-containing protein
SEQF5007|JADGMA010000034.1
MBF0713060.1
Genome Viewer
NA
AA
345/115
16141-16485
YlbF/YmcA family competence regulator
SEQF5007|JADGMA010000034.1
MBF0713061.1
Genome Viewer
NA
AA
1197/399
16890-18086
DNA repair exonuclease
SEQF5007|JADGMA010000034.1
MBF0713062.1
Genome Viewer
NA
AA
2940/980
18076-21015
AAA family ATPase
SEQF5007|JADGMA010000034.1
MBF0713063.1
Genome Viewer
NA
AA
942/314
21012-21953
3'-5' exoribonuclease YhaM
SEQF5007|JADGMA010000034.1
MBF0713064.1
Genome Viewer
NA
AA
105/35
22144-22248
type I toxin-antitoxin system Fst family toxin
SEQF5007|JADGMA010000034.1
MBF0713065.1
Genome Viewer
NA
AA
1002/334
23404-22403
peptidylprolyl isomerase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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